Transcript: ARNT2-001 OTTHUMT00000384389.2

Description

aryl-hydrocarbon receptor nuclear translocator 2

Location

Chromosome 15: 80,404,351-80,597,937 forward strand.

About this transcript

This transcript has 19 exons and is annotated with 36 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000165478 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
ARNT2-001	OTTHUMT00000384389.2	6558	717aa	OTTHUMP00000229925	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS32307	X5DQN9
ARNT2-006	OTTHUMT00000384436.2	6690	706aa	OTTHUMP00000247736	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9HBZ2
ARNT2-004	OTTHUMT00000384390.2	2458	706aa	OTTHUMP00000247735	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q9HBZ2
ARNT2-007	OTTHUMT00000384437.3	585	130aa	OTTHUMP00000247776	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YKW1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
ARNT2-003	OTTHUMT00000384388.2	2941	No protein	-	<p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact	-	-
ARNT2-008	OTTHUMT00000384438.2	714	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
ARNT2-002	OTTHUMT00000384387.1	1145	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARNT2-009	OTTHUMT00000384440.1	585	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
ARNT2-011	OTTHUMT00000417520.1	571	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 19 Transcript length: 6,558 bps Translation length: 717 residues

CCDS

This transcript is a member of the Human CCDS set: CCDS32307

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 28/02/2014 (Created on 14/05/2010)

Alternative symbols

RP11-379K22.1-001

Other assemblies

This transcript maps to 80,404,351-80,597,937 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000303329

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: ARNT2-001 OTTHUMT00000384389.2

Summary

Transcript-based displays