Transcript: RIC1-006 OTTHUMT00000400918.1

Description

RAB6A GEF complex partner 1

Location

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
RIC1-002	OTTHUMT00000051636.3	6774	1423aa	OTTHUMP00000021032	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS34982	Q4ADV7
RIC1-001	OTTHUMT00000051635.3	4127	1165aa	OTTHUMP00000021031	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS47949	-
RIC1-003	OTTHUMT00000354835.2	3998	1315aa	OTTHUMP00000214991	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RIC1-005	OTTHUMT00000354837.2	564	147aa	OTTHUMP00000239361	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RIC1-006	OTTHUMT00000400918.1	2599	163aa	OTTHUMP00000239360	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
RIC1-004	OTTHUMT00000354836.1	3973	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 2,599 bps Translation length: 163 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 17/11/2010)

Alternative symbols

RP11-207C16.5-006

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 5,763,397-5,775,238 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000545243

Curation Method

Manual annotation from Havana