Description
SMEK homolog 1, suppressor of mek1 (Dictyostelium)
Location
Chromosome 14: 91,485,632-91,510,300 reverse strand.
About this transcript
This transcript has 4 exons and is annotated with 5 domains and features.
Gene
This transcript is a product of gene OTTHUMG00000171102 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| SMEK1-001 | OTTHUMT00000411664.1 | 4108 | 820aa | OTTHUMP00000245082 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS9895 | - | |
| SMEK1-003 | OTTHUMT00000411667.1 | 3236 | 594aa | OTTHUMP00000245084 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS61532 | - | |
| SMEK1-007 | OTTHUMT00000411665.1 | 3369 | 833aa | OTTHUMP00000245083 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q6IN85 | |
| SMEK1-012 | OTTHUMT00000411675.2 | 595 | 199aa | OTTHUMP00000245088 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| SMEK1-010 | OTTHUMT00000411677.1 | 580 | 99aa | OTTHUMP00000245090 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMEK1-011 | OTTHUMT00000411673.2 | 571 | 190aa | OTTHUMP00000245087 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMEK1-009 | OTTHUMT00000411676.2 | 534 | 150aa | OTTHUMP00000245089 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
| SMEK1-006 | OTTHUMT00000411666.1 | 3431 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SMEK1-004 | OTTHUMT00000411671.1 | 2436 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| SMEK1-002 | OTTHUMT00000411672.2 | 2953 | 706aa | OTTHUMP00000245086 | Non stop decay | - | - | |
| SMEK1-005 | OTTHUMT00000411670.1 | 2515 | 543aa | OTTHUMP00000245085 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
| SMEK1-013 | OTTHUMT00000411669.1 | 819 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
| SMEK1-008 | OTTHUMT00000411674.1 | 1944 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| SMEK1-014 | OTTHUMT00000411668.1 | 844 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
