Transcript: VRK1-003 OTTHUMT00000413522.1

Description

vaccinia related kinase 1

Location

Chromosome 14: 96,852,888-96,931,722 forward strand.

About this transcript

This transcript has 7 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTHUMG00000171459 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
VRK1-001	OTTHUMT00000413520.1	1745	396aa	OTTHUMP00000246088	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS9947	Q99986
VRK1-003	OTTHUMT00000413522.1	1029	232aa	OTTHUMP00000246089	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YJ50	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VRK1-006	OTTHUMT00000413523.1	599	176aa	OTTHUMP00000246090	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YJJ9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VRK1-005	OTTHUMT00000413525.1	247	65aa	OTTHUMP00000246091	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
VRK1-004	OTTHUMT00000413524.1	604	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VRK1-007	OTTHUMT00000413526.1	415	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
VRK1-002	OTTHUMT00000413521.1	667	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 1,029 bps Translation length: 232 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 19/04/2011)

Alternative symbols

RP11-187K17.1-003

Annotation Attributes

dotter confirmed [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 96,852,888-96,931,722 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000557222

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: VRK1-003 OTTHUMT00000413522.1

Summary

Transcript-based displays