Transcript: DET1-003 OTTHUMT00000415441.1

Description

de-etiolated homolog 1 (Arabidopsis)

Location

About this transcript

This transcript has 5 exons.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
DET1-007	OTTHUMT00000432801.1	2315	561aa	OTTHUMP00000254630	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45343	-
DET1-001	OTTHUMT00000415442.2	2267	550aa	OTTHUMP00000246969	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS45344	Q7L5Y6
DET1-004	OTTHUMT00000415444.1	583	94aa	OTTHUMP00000246970	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
DET1-002	OTTHUMT00000415440.2	2722	67aa	OTTHUMP00000246967	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
DET1-003	OTTHUMT00000415441.1	1925	67aa	OTTHUMP00000246968	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
DET1-006	OTTHUMT00000415648.1	161	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
DET1-008	OTTHUMT00000471230.1	3844	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 5 Transcript length: 1,925 bps Translation length: 67 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 18/05/2011)

Alternative symbols

RP11-97O12.1-003

Other assemblies

This transcript maps to 88,512,483-88,546,660 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000557837

Curation Method

Manual annotation from Havana