Transcript: SHC4-005 OTTHUMT00000417377.1

Description

SHC (Src homology 2 domain containing) family, member 4

Location

About this transcript

This transcript has 7 exons and is annotated with 6 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
SHC4-001	OTTHUMT00000254371.1	4558	630aa	OTTHUMP00000162250	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS10130	Q6S5L8
SHC4-003	OTTHUMT00000417375.1	2799	387aa	OTTHUMP00000247879	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-
SHC4-002	OTTHUMT00000417376.1	1447	344aa	OTTHUMP00000247880	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F5H5M1
SHC4-004	OTTHUMT00000417378.1	885	128aa	OTTHUMP00000247882	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	H0YLZ2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
SHC4-005	OTTHUMT00000417377.1	821	144aa	OTTHUMP00000247881	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	H0YLU6
SHC4-006	OTTHUMT00000417379.1	864	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 7 Transcript length: 821 bps Translation length: 144 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 14/06/2011)

Alternative symbols

AC012379.1-005

Other assemblies

This transcript maps to 48,834,846-48,877,629 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENST00000557797

Curation Method

Manual annotation from Havana