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Description

smg-9 homolog, nonsense mediated mRNA decay factor (C. elegans)

Location
About this transcript

This transcript has 2 exons.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
SMG9-001OTTHUMT00000317668.25510520aaOTTHUMP00000197093
 
Protein coding
CCDS33043Q9H0W8
SMG9-002OTTHUMT00000463586.12387495aaOTTHUMP00000270139
 
Protein coding
--
SMG9-008OTTHUMT00000463592.2697156aaOTTHUMP00000270142
 
Protein coding
--CDS 3' incomplete
SMG9-005OTTHUMT00000463591.2650183aaOTTHUMP00000270141
 
Protein coding
--CDS 3' incomplete
SMG9-007OTTHUMT00000463595.2576115aaOTTHUMP00000270145
 
Protein coding
--CDS 3' incomplete
SMG9-006OTTHUMT00000463593.2550148aaOTTHUMP00000270143
 
Protein coding
--CDS 3' incomplete
SMG9-009OTTHUMT00000463594.2438120aaOTTHUMP00000270144
 
Protein coding
--CDS 3' incomplete
SMG9-004OTTHUMT00000463589.11077157aaOTTHUMP00000270140
 
Nonsense mediated decay
--CDS 5' incomplete
SMG9-003OTTHUMT00000463590.11401No protein-
 
Retained intron
--
SMG9-010OTTHUMT00000463596.1681No protein-
 
Retained intron
--
SMG9-011OTTHUMT00000463588.1574No protein-
 
Retained intron
--
SMG9-012OTTHUMT00000463587.1563No protein-
 
Retained intron
--
SMG9-013OTTHUMT00000463585.1538No protein-
 
Retained intron
--
Statistics

Exons: 2 Transcript length: 563 bps

Class

retained intron [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 28/02/2014 (Created on 09/07/2012)

Alternative symbols

AC004780.2-012

Other assemblies

This transcript maps to 43,733,344-43,734,079 in GRCh38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays