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Description

procollagen type XVI alpha 1

INSDC coordinates

chromosome:VEGA56:CM000997.2:130047840:130099283:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Col16a1-001OTTMUST000000217515206 bp1580 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38889Q8BLX7
Col16a1-004OTTMUST000000217544037 bp1283 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV7 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Col16a1-012OTTMUST00000021762452 bp129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV6 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col16a1-005OTTMUST00000021755410 bp22 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV1 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col16a1-006OTTMUST00000021756383 bp61 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A3KFV2 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Col16a1-002OTTMUST000000217525138 bp1046 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9Q0X4
Col16a1-003OTTMUST000000217534574 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-009OTTMUST000000217593519 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-013OTTMUST00000050688833 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-011OTTMUST00000021761717 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-008OTTMUST00000021758445 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-010OTTMUST00000021760322 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Col16a1-007OTTMUST00000021757477 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Gene-based displays