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Description

procollagen type XVI alpha 1

INSDC coordinates

chromosome:VEGA56:CM000997.2:130047840:130099283:1

Transcripts

This gene has 13 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Col16a1-001OTTMUST000000217515206OTTMUSP000000099211580Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS38889
Col16a1-004OTTMUST000000217544037OTTMUSP000000099241283Protein codingGenes and/or transcript that contains an open reading frame (ORF).5'-
Col16a1-012OTTMUST00000021762452OTTMUSP00000023722129Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Col16a1-005OTTMUST00000021755410OTTMUSP0000000992522Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Col16a1-006OTTMUST00000021756383OTTMUSP0000000992661Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Col16a1-002OTTMUST000000217525138OTTMUSP000000422811046Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Col16a1-003OTTMUST000000217534574No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Col16a1-009OTTMUST000000217593519No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Col16a1-013OTTMUST00000050688833No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Col16a1-011OTTMUST00000021761717No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Col16a1-008OTTMUST00000021758445No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Col16a1-010OTTMUST00000021760322No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Col16a1-007OTTMUST00000021757477No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--

Gene-based displays