This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Strc OTTMUSG00000015264

.

Description

stereocilin

Location

Chromosome 2: 121,363,728-121,387,168 reverse strand.

About this gene

This gene has 5 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Strc-001	OTTMUST00000036173.1	5756	1809aa	OTTMUSP00000016253	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16641	Q8VIM6
Strc-004	OTTMUST00000063572.2	1059	108aa	OTTMUSP00000038625	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6UNX5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Strc-003	OTTMUST00000063571.3	566	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Strc-002	OTTMUST00000036174.1	2067	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Strc-005	OTTMUST00000063573.1	468	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

.

Summary

.

.

Gene-based displays