This is an archived version of Vega. Click here for more information.

Mouse

Loading…

Help & Documentation

Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments (3)
- Orthologues (26)
- Alt. alleles
Ontologies
Gene expression
External references
Supporting evidence
Other genome browsers
- Ensembl

Configure this page

Share this page

Bookmark this page

.

Gene: Col4a5 OTTMUSG00000018954

.

Description

procollagen type IV alpha 5

Location

Chromosome X: 141,475,385-141,689,234 forward strand.

About this gene

This gene has 4 transcripts (splice variants), 26 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col4a5-001	OTTMUST00000045528.7	6536	1691aa	OTTMUSP00000020465	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41154	Q63ZW6
Col4a5-002	OTTMUST00000047112.2	6285	1691aa	OTTMUSP00000021282	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS41154	Q63ZW6
Col4a5-003	OTTMUST00000047232.1	3511	800aa	OTTMUSP00000021316	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7CK55	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col4a5-004	OTTMUST00000047233.1	728	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

.

Summary

.

.

Gene-based displays