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Summary
- Splice variants
- Transcript comparison
Sequence
Comparative Genomics
- Genomic alignments
- Orthologues
- Alt. alleles
Ontologies
Gene expression
External references
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Gene: Col22a1 OTTMUSG00000033423

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Description

collagen, type XXII, alpha 1

Location

Chromosome 15: 71,795,795-72,034,227 reverse strand.

About this gene

This gene has 4 transcripts (splice variants), 27 orthologues and 25 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Col22a1-001	OTTMUST00000084152.3	8809	1613aa	OTTMUSP00000045312	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS49627	E9Q7P1
Col22a1-003	OTTMUST00000054282.5	688	162aa	OTTMUSP00000025892	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CYH5	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Col22a1-004	OTTMUST00000084227.1	659	203aa	OTTMUSP00000045366	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6TGL6	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Col22a1-002	OTTMUST00000054338.1	1210	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

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Summary

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Gene-based displays