Description
survival motor neuron 1
Location
Chromosome 13: 100,124,852-100,137,690 forward strand.
About this gene
This gene has 10 transcripts (splice variants) and 2 orthologues.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
|---|---|---|---|---|---|---|---|---|
| Smn1-001 | OTTMUST00000084239.1 | 1222 | 288aa | OTTMUSP00000045374 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS26725 | P97801 | |
| Smn1-008 | OTTMUST00000084246.2 | 485 | 161aa | OTTMUSP00000045377 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | B8JJX7 | 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete |
| Smn1-003 | OTTMUST00000084241.1 | 223 | 39aa | OTTMUSP00000045375 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | Q5PXT4 | |
| Smn1-004 | OTTMUST00000084242.1 | 378 | No protein | - | <p>Error in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the <a rel="external" href="http://vega.sanger.ac.uk/info/about/gene_and_transcript_types.html">VEGA/Havana</a> project.</p>Artifact | - | - | |
| Smn1-006 | OTTMUST00000084244.1 | 421 | 46aa | OTTMUSP00000045376 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | D6RI18 | |
| Smn1-005 | OTTMUST00000084243.1 | 639 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smn1-007 | OTTMUST00000084245.1 | 600 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smn1-009 | OTTMUST00000084247.1 | 547 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smn1-002 | OTTMUST00000084240.1 | 453 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
| Smn1-010 | OTTMUST00000084248.1 | 417 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |
