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Updated annotation available

There is updated annotation for this transcript available here.

Description

protocadherin 15

Location
Gene

This transcript is a product of gene OTTMUSG00000021142

This gene has 33 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Pcdh15-001OTTMUST000000500626947 bp1943 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35934Q99PJ1
Pcdh15-007OTTMUST000001041996932 bp1938 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56715-
Pcdh15-009OTTMUST000000500646926 bp1936 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56718-
Pcdh15-031OTTMUST000001042006917 bp1933 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48594-
Pcdh15-028OTTMUST000001041876866 bp1916 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56720-
Pcdh15-006OTTMUST000000500616857 bp1913 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56721-
Pcdh15-029OTTMUST000001041986806 bp1896 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48595-
Pcdh15-016OTTMUST000001042026719 bp1867 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56719-
Pcdh15-030OTTMUST000000500556322 bp1518 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56716-
Pcdh15-004OTTMUST000000500596287 bp1790 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56711-
Pcdh15-010OTTMUST000001042085696 bp1682 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56713-
Pcdh15-002OTTMUST000000500575681 bp1677 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56717-
Pcdh15-019OTTMUST000001041854879 bp1176 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56712-
Pcdh15-027OTTMUST000001041884863 bp1171 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56714-
Pcdh15-021OTTMUST000000500755336 bp1129 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YTL2
Pcdh15-014OTTMUST000000500563860 bp981 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-017OTTMUST000001041843300 bp650 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-013OTTMUST000000500683074 bp719 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-012OTTMUST000000500672867 bp650 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-011OTTMUST000000500662754 bp334 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-005OTTMUST000000500601891 bp415 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-033OTTMUST00000104220472 bp16 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BLR6 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Pcdh15-008OTTMUST000000500635207 bp No protein product
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Pcdh15-015OTTMUST000001042036852 bp684 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Pcdh15-032OTTMUST000001042016846 bp684 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Pcdh15-003OTTMUST000000500583315 bp326 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Pcdh15-025OTTMUST000000501613404 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pcdh15-018OTTMUST000000500722841 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pcdh15-023OTTMUST000000501592712 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-022OTTMUST000000501582436 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-024OTTMUST000000501601024 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-020OTTMUST00000050074691 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-026OTTMUST00000050162460 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Protein domains for OTTMUSP00000023313.2

Transcript-based displays