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Updated annotation available

There is updated annotation for this transcript available here.

Description

CDK5 regulatory subunit associated protein 1-like 1

Location
About this transcript

This transcript has 16 exons and is annotated with 10 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Cdkal1-001OTTMUST000000012822629578aaOTTMUSP00000000607
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26412Q91WE6
Cdkal1-004OTTMUST000000748282427136aaOTTMUSP00000039106
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Cdkal1-002OTTMUST00000074826518107aaOTTMUSP00000039105
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6S0I8 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Cdkal1-010OTTMUST0000007483443096aaOTTMUSP00000039111
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B7FAT1 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cdkal1-005OTTMUST0000007482940980aaOTTMUSP00000039107
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-I7HPB3 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Cdkal1-007OTTMUST000000748313372520aaOTTMUSP00000039108
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Cdkal1-008OTTMUST000000748322519218aaOTTMUSP00000039109
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Cdkal1-009OTTMUST0000007483369497aaOTTMUSP00000039110
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RJ19
Cdkal1-006OTTMUST000000748304383No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Cdkal1-003OTTMUST000000748272019No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Cdkal1-011OTTMUST00000074835907No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 16 Transcript length: 2,629 bps Translation length: 578 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26412

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 13/03/2012 (Created on 30/07/2003)

Alternative symbols

RP23-202F3.2-001

Other assemblies

This transcript maps to 29,325,301-29,855,674 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays