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Description

breast cancer 1

Gene

This transcript is a product of gene OTTMUSG00000002870

This gene has 7 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Brca1-001OTTMUST000000058696572 bp1812 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25474P48754
Brca1-007OTTMUST00000119752531 bp177 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Brca1-005OTTMUST00000119754355 bp79 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Brca1-002OTTMUST000000058701917 bp75 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Brca1-006OTTMUST00000119753852 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Brca1-003OTTMUST000000058712136 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Brca1-004OTTMUST00000005872539 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 23 Transcript length: 6,572 bps Translation length: 1,812 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25474

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 08/11/2013 (Created on 19/07/2004)

Alternative symbols

RP23-328K2.8-001

Other assemblies

This transcript maps to 101,488,764-101,551,879 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays