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Updated annotation available

There is updated annotation for this transcript available here.

Description

tRNA splicing endonuclease 54 homolog (SEN54, S. cerevisiae)

About this transcript

This transcript has 11 exons and is annotated with 5 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Tsen54-001OTTMUST000000075891979525aaOTTMUSP00000003671
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25648Q8C2A2
Tsen54-002OTTMUST000000075901862486aaOTTMUSP00000003672
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Tsen54-007OTTMUST00000007778963153aaOTTMUSP00000038115
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B0QZP4 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Tsen54-005OTTMUST00000007593825275aaOTTMUSP00000003673
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1ATA6 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Tsen54-008OTTMUST00000073576494165aaOTTMUSP00000038114
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6X5E8 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Tsen54-003OTTMUST00000007591858No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Tsen54-004OTTMUST00000007592803No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Tsen54-006OTTMUST00000007594522No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 11 Transcript length: 1,979 bps Translation length: 525 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25648

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 30/07/2004)

Alternative symbols

RP23-354K2.5-001

Remarks

0610034P02Rik

Other assemblies

This transcript maps to 115,814,724-115,823,094 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays