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Description

tRNA splicing endonuclease 54 homolog (SEN54, S. cerevisiae)

Gene

This transcript is a product of gene OTTMUSG00000003539

This gene has 8 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Tsen54-001OTTMUST000000075891979 bp525 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS25648Q8C2A2
Tsen54-002OTTMUST000000075901862 bp486 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Tsen54-007OTTMUST00000007778963 bp153 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B0QZP4 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Tsen54-005OTTMUST00000007593825 bp275 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1ATA6 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Tsen54-008OTTMUST00000073576494 bp165 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6X5E8 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Tsen54-003OTTMUST00000007591858 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Tsen54-004OTTMUST00000007592803 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Tsen54-006OTTMUST00000007594522 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 11 Transcript length: 1,979 bps Translation length: 525 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25648

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 30/07/2004)

Alternative symbols

RP23-354K2.5-001

Remarks

0610034P02Rik

Other assemblies

This transcript maps to 115,814,724-115,823,094 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays