Transcript: Mmp16-004 OTTMUST00000010500.3

Description

matrix metalloproteinase 16

Location

About this transcript

This transcript has 4 exons and is annotated with 7 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Mmp16-001	OTTMUST00000010497.1	5011	607aa	OTTMUSP00000004975	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS17989	Q9WTR0
Mmp16-004	OTTMUST00000010500.3	853	127aa	OTTMUSP00000004977	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AVG8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp16-005	OTTMUST00000010501.2	601	174aa	OTTMUSP00000004978	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	B1AVH0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Mmp16-002	OTTMUST00000010498.3	3470	415aa	OTTMUSP00000065405	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	V9GXD8
Mmp16-003	OTTMUST00000010499.2	3797	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Mmp16-006	OTTMUST00000010502.2	729	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 853 bps Translation length: 127 residues

Class

protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/07/2015 (Created on 03/09/2004)

Alternative symbols

RP23-120P2.1-004

Remarks

CDS end not found

mRNA end not found

Other assemblies

This transcript maps to 17,853,091-17,996,293 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000142434

Curation Method

Manual annotation from Havana