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Description

interferon regulatory factor 1

Location
About this transcript

This transcript has 10 exons and is annotated with 9 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Irf1-001OTTMUST000000125632137329aaOTTMUSP00000005820
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24686Q5SX13
Irf1-008OTTMUST000000440652092304aaOTTMUSP00000019805
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48796Q3U5M1
Irf1-002OTTMUST000000125642069329aaOTTMUSP00000005821
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24686Q5SX13
Irf1-010OTTMUST00000071566833199aaOTTMUSP00000036703
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8Y5B9 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-005OTTMUST00000012566823182aaOTTMUSP00000005822
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SX14 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-007OTTMUST0000001256852562aaOTTMUSP00000005824
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SX16 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-006OTTMUST00000012567515132aaOTTMUSP00000005823
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SX15 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-009OTTMUST0000004406651751aaOTTMUSP00000036704
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RH71
Irf1-004OTTMUST00000012565943No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Irf1-003OTTMUST00000012562799No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 10 Transcript length: 2,137 bps Translation length: 329 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24686

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 31/07/2012 (Created on 04/09/2003)

Alternative symbols

RP23-303F24.1-001

Other assemblies

This transcript maps to 53,770,014-53,777,323 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays