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Description

interferon regulatory factor 1

Location
Gene

This transcript is a product of gene OTTMUSG00000005648

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Irf1-001OTTMUST000000125632137 bp329 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24686Q5SX13
Irf1-008OTTMUST000000440652092 bp304 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48796Q3U5M1
Irf1-002OTTMUST000000125642069 bp329 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS24686Q5SX13
Irf1-010OTTMUST00000071566833 bp199 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A8Y5B9 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-005OTTMUST00000012566823 bp182 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SX14 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-007OTTMUST00000012568525 bp62 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SX16 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-006OTTMUST00000012567515 bp132 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q5SX15 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Irf1-009OTTMUST00000044066517 bp51 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RH71
Irf1-004OTTMUST00000012565943 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Irf1-003OTTMUST00000012562799 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 10 Transcript length: 2,137 bps Translation length: 329 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24686

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 31/07/2012 (Created on 04/09/2003)

Alternative symbols

RP23-303F24.1-001

Other assemblies

This transcript maps to 53,770,014-53,777,323 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays