Transcript: Cacna1b-008 OTTMUST00000029157.3

Description

calcium channel, voltage-dependent, N type, alpha 1B subunit

Location

Chromosome 2: 24,609,932-24,637,479 reverse strand.

About this transcript

This transcript has 9 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000012011 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cacna1b-001	OTTMUST00000028477.3	9655	2288aa	OTTMUSP00000012891	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS15739	A2AIS0
Cacna1b-002	OTTMUST00000029151.3	6984	2327aa	OTTMUSP00000013173	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS38065	O55017
Cacna1b-004	OTTMUST00000029153.2	9736	2325aa	OTTMUSP00000013175	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2AIR9
Cacna1b-003	OTTMUST00000029152.2	6987	2328aa	OTTMUSP00000013174	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2AIR7
Cacna1b-009	OTTMUST00000029158.3	684	228aa	OTTMUSP00000013178	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cacna1b-006	OTTMUST00000029155.3	523	168aa	OTTMUSP00000069544	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Cacna1b-007	OTTMUST00000029156.3	332	111aa	OTTMUSP00000013177	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F7C9S8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cacna1b-005	OTTMUST00000029154.3	308	102aa	OTTMUSP00000013176	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A2AJ01	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Cacna1b-008	OTTMUST00000029157.3	949	114aa	OTTMUSP00000069545	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	A0A0A6YWZ5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Summary

Statistics

Exons: 9 Transcript length: 949 bps Translation length: 114 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 26/06/2014 (Created on 08/06/2005)

Alternative symbols

RP23-264D16.5-008

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 24,609,932-24,637,479 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000125798

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Cacna1b-008 OTTMUST00000029157.3

Summary

Transcript-based displays