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Updated annotation

The annotation for this transcript is newer than that present in Ensembl.

Description

methyl-CpG binding domain protein 5

Location
About this transcript

This transcript has 10 exons and is annotated with 24 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Mbd5-001OTTMUST0000002966285431728aaOTTMUSP00000013341
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS38122B1AYB5
Mbd5-003OTTMUST0000002966459781498aaOTTMUSP00000013343
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS71051B1AYB6
Mbd5-005OTTMUST000000414106037856aaOTTMUSP00000018579
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-B1AYB7
Mbd5-002OTTMUST0000002966337421067aaOTTMUSP00000013342
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6Q8U1 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mbd5-015OTTMUST0000013689666077aaOTTMUSP00000072178
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mbd5-013OTTMUST00000136894360120aaOTTMUSP00000072176
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Mbd5-006OTTMUST000000414116197435aaOTTMUSP00000062201
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q3TTF1 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mbd5-014OTTMUST00000136895928113aaOTTMUSP00000072177
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mbd5-004OTTMUST00000136893785156aaOTTMUSP00000072175
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mbd5-009OTTMUST000000296333401No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Mbd5-007OTTMUST00000029645713No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Mbd5-008OTTMUST00000029644621No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Mbd5-010OTTMUST00000029647608No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Mbd5-012OTTMUST00000136892501No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Mbd5-011OTTMUST00000029646351No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Statistics

Exons: 10 Transcript length: 8,543 bps Translation length: 1,728 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS38122

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 02/12/2014 (Created on 17/06/2005)

Alternative symbols

RP23-167N13.1-001

Remarks

NP_084200.1

Other assemblies

This transcript maps to 49,245,969-49,319,690 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays