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Description

paired box gene 6

Gene

This transcript is a product of gene OTTMUSG00000015006

This gene has 27 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Pax6-012OTTMUST000000356493116 bp422 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57181P63015
Pax6-011OTTMUST000000356483069 bp422 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57181P63015
Pax6-013OTTMUST000000356502869 bp436 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16499-
Pax6-008OTTMUST000000356452779 bp436 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16499-
Pax6-001OTTMUST000000356402601 bp436 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS16499-
Pax6-002OTTMUST000000356412559 bp422 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57181P63015
Pax6-009OTTMUST000000356462370 bp422 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57181P63015
Pax6-004OTTMUST000000356434427 bp254 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2A412
Pax6-017OTTMUST000000356541635 bp139 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-A2A409 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Pax6-015OTTMUST00000035652528 bp18 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-V9GXI6 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Pax6-006OTTMUST000000971571126 bp No protein product
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Pax6-007OTTMUST00000084075807 bp No protein product
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Pax6-026OTTMUST000000356632148 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-003OTTMUST00000035642983 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-019OTTMUST00000035656925 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-021OTTMUST00000035658874 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-020OTTMUST00000035657870 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-005OTTMUST00000035644834 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-023OTTMUST00000035660778 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-022OTTMUST00000035659743 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-018OTTMUST00000035655654 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-010OTTMUST00000035647608 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pax6-014OTTMUST000000356512919 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pax6-024OTTMUST000000356612343 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pax6-025OTTMUST000000356621096 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Pax6-016OTTMUST00000035653538 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pax6-027OTTMUST00000035860527 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 14 Transcript length: 2,779 bps Translation length: 436 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16499

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 05/04/2013 (Created on 02/02/2006)

Alternative symbols

RP23-431C3.1-008

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 105,675,433-105,697,344 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays