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Description

paired box gene 6

Gene

This transcript is a product of gene OTTMUSG00000015006

This gene has 27 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Pax6-012OTTMUST000000356493116OTTMUSP00000015979422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS57181
Pax6-011OTTMUST000000356483069OTTMUSP00000015978422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS57181
Pax6-013OTTMUST000000356502869OTTMUSP00000015980436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS16499
Pax6-008OTTMUST000000356452779OTTMUSP00000015975436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS16499
Pax6-001OTTMUST000000356402601OTTMUSP00000015972436Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS16499
Pax6-002OTTMUST000000356412559OTTMUSP00000015973422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS57181
Pax6-009OTTMUST000000356462370OTTMUSP00000015976422Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS57181
Pax6-004OTTMUST000000356434427OTTMUSP00000015974254Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Pax6-017OTTMUST000000356541635OTTMUSP00000015981139Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Pax6-015OTTMUST00000035652528OTTMUSP0000006561118Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Pax6-006OTTMUST000000971571126No protein product-ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.--
Pax6-007OTTMUST00000084075807No protein product-ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.--
Pax6-026OTTMUST000000356632148No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-003OTTMUST00000035642983No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-019OTTMUST00000035656925No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-021OTTMUST00000035658874No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-020OTTMUST00000035657870No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-005OTTMUST00000035644834No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-023OTTMUST00000035660778No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-022OTTMUST00000035659743No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-018OTTMUST00000035655654No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-010OTTMUST00000035647608No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Pax6-014OTTMUST000000356512919No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Pax6-024OTTMUST000000356612343No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Pax6-025OTTMUST000000356621096No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Pax6-016OTTMUST00000035653538No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Pax6-027OTTMUST00000035860527No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 14 Transcript length: 2,779 bps Translation length: 436 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS16499

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 05/04/2013 (Created on 02/02/2006)

Alternative symbols

RP23-431C3.1-008

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 105,675,433-105,697,344 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays