Transcript: Strc-004 OTTMUST00000063572.2

Description

stereocilin

Location

About this transcript

This transcript has 9 exons and is annotated with 3 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Strc-001	OTTMUST00000036173.1	5756	1809aa	OTTMUSP00000016253	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS16641	Q8VIM6
Strc-004	OTTMUST00000063572.2	1059	108aa	OTTMUSP00000038625	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	F6UNX5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Strc-003	OTTMUST00000063571.3	566	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Strc-002	OTTMUST00000036174.1	2067	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Strc-005	OTTMUST00000063573.1	468	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 9 Transcript length: 1,059 bps Translation length: 108 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 06/06/2007)

Alternative symbols

RP23-433P19.4-004

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 121,368,403-121,375,031 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000129136

Curation Method

Manual annotation from Havana