Description

regulatory factor X, 5 (influences HLA class II expression)

Location
About this transcript

This transcript has 11 exons and is annotated with 11 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Rfx5-017OTTMUST00000082651.14333658aaOTTMUSP00000044332
 
Protein coding
CCDS17598Q9JL61
Rfx5-009OTTMUST00000055675.22355658aaOTTMUSP00000026691
 
Protein coding
CCDS17598Q9JL61
Rfx5-010OTTMUST00000055676.12350658aaOTTMUSP00000026692
 
Protein coding
CCDS17598Q9JL61
Rfx5-004OTTMUST00000047064.14450303aaOTTMUSP00000021261
 
Protein coding
-Q6DI69
Rfx5-016OTTMUST00000055682.14367303aaOTTMUSP00000026698
 
Protein coding
-Q6DI69
Rfx5-012OTTMUST00000055678.2882181aaOTTMUSP00000026694
 
Protein coding
-D3Z0D4 CDS 3' incomplete
Rfx5-014OTTMUST00000055680.2565105aaOTTMUSP00000026696
 
Protein coding
-D3YZK7 CDS 3' incomplete
Rfx5-015OTTMUST00000055681.253890aaOTTMUSP00000026697
 
Protein coding
-D3YTK4 CDS 3' incomplete
Rfx5-013OTTMUST00000055679.253695aaOTTMUSP00000026695
 
Protein coding
-D3YVW1 CDS 3' incomplete
Rfx5-005OTTMUST00000047065.2486131aaOTTMUSP00000021262
 
Protein coding
-K4DI79 CDS 3' incomplete
Rfx5-001OTTMUST00000047061.2401441aaOTTMUSP00000038518
 
Nonsense mediated decay
-D6RDE5
Rfx5-006OTTMUST00000047066.370541aaOTTMUSP00000038519
 
Nonsense mediated decay
-D6RDE5
Rfx5-018OTTMUST00000082652.152541aaOTTMUSP00000044333
 
Nonsense mediated decay
-D6RDE5
Rfx5-007OTTMUST00000047067.1346No protein-
 
Processed transcript
--
Rfx5-002OTTMUST00000047062.14139No protein-
 
Retained intron
--
Rfx5-008OTTMUST00000047068.1680No protein-
 
Retained intron
--
Statistics

Exons: 11 Transcript length: 2,355 bps Translation length: 658 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17598

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/11/2013 (Created on 12/02/2007)

Alternative symbols

AC087062.4-009

Other assemblies

This transcript maps to 94,954,075-94,959,496 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays