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Description

regulatory factor X, 5 (influences HLA class II expression)

Location
Gene

This transcript is a product of gene OTTMUSG00000019670

This gene has 16 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Rfx5-017OTTMUST000000826514333OTTMUSP00000044332658Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS17598
Rfx5-009OTTMUST000000556752355OTTMUSP00000026691658Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS17598
Rfx5-010OTTMUST000000556762350OTTMUSP00000026692658Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS17598
Rfx5-004OTTMUST000000470644450OTTMUSP00000021261303Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Rfx5-016OTTMUST000000556824367OTTMUSP00000026698303Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Rfx5-012OTTMUST00000055678882OTTMUSP00000026694182Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Rfx5-014OTTMUST00000055680565OTTMUSP00000026696105Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Rfx5-015OTTMUST00000055681538OTTMUSP0000002669791Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Rfx5-013OTTMUST00000055679536OTTMUSP0000002669595Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Rfx5-005OTTMUST00000047065486OTTMUSP00000021262131Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Rfx5-001OTTMUST000000470614014OTTMUSP0000003851841Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Rfx5-006OTTMUST00000047066705OTTMUSP0000003851941Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Rfx5-018OTTMUST00000082652525OTTMUSP0000004433341Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Rfx5-007OTTMUST00000047067346No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Rfx5-002OTTMUST000000470624139No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Rfx5-008OTTMUST00000047068680No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 11 Transcript length: 2,355 bps Translation length: 658 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS17598

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 05/11/2013 (Created on 12/02/2007)

Alternative symbols

AC087062.4-009

Other assemblies

This transcript maps to 94,954,075-94,959,496 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays