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Description

ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)

Gene

This transcript is a product of gene OTTMUSG00000019900

This gene has 18 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
Cln3-002OTTMUST000000474373203438 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21833Q61124
Cln3-001OTTMUST000000474362386438 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS21833Q61124
Cln3-003OTTMUST000000474381571414 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q6PAH4
Cln3-008OTTMUST00000047443834196 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YUU4 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-011OTTMUST00000047446725151 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z448 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-007OTTMUST0000004744259469 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z6L5 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-010OTTMUST0000004744552570 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YZN0 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-009OTTMUST0000004744446051 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVA8 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Cln3-012OTTMUST0000004744777177 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-S4R2L1
Cln3-014OTTMUST00000047449977No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Cln3-013OTTMUST00000047448809No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Cln3-017OTTMUST00000047452537No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Cln3-018OTTMUST00000047453527No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Cln3-006OTTMUST00000047441414No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Cln3-004OTTMUST000000474391821No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Cln3-016OTTMUST00000047451913No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Cln3-005OTTMUST00000047440812No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Cln3-015OTTMUST00000047450506No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 15 Transcript length: 2,386 bps Translation length: 438 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21833

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/03/2012 (Created on 31/08/2006)

Alternative symbols

AC125169.1-001

Other assemblies

This transcript maps to 126,571,400-126,583,247 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays