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Description

ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)

Gene

This transcript is a product of gene OTTMUSG00000019900

This gene has 18 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Cln3-002OTTMUST000000474373203OTTMUSP00000021443438Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS21833
Cln3-001OTTMUST000000474362386OTTMUSP00000021442438Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS21833
Cln3-003OTTMUST000000474381571OTTMUSP00000021444414Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Cln3-008OTTMUST00000047443834OTTMUSP00000021446196Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Cln3-011OTTMUST00000047446725OTTMUSP00000021449151Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Cln3-007OTTMUST00000047442594OTTMUSP0000002144569Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Cln3-010OTTMUST00000047445525OTTMUSP0000002144870Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Cln3-009OTTMUST00000047444460OTTMUSP0000002144751Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Cln3-012OTTMUST00000047447771OTTMUSP0000006516777Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Cln3-014OTTMUST00000047449977No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Cln3-013OTTMUST00000047448809No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Cln3-017OTTMUST00000047452537No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Cln3-018OTTMUST00000047453527No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Cln3-006OTTMUST00000047441414No protein product-Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.--
Cln3-004OTTMUST000000474391821No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Cln3-016OTTMUST00000047451913No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Cln3-005OTTMUST00000047440812No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Cln3-015OTTMUST00000047450506No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 15 Transcript length: 2,386 bps Translation length: 438 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS21833

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 20/03/2012 (Created on 31/08/2006)

Alternative symbols

AC125169.1-001

Other assemblies

This transcript maps to 126,571,400-126,583,247 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays