Transcript: Sema4c-002 OTTMUST00000049350.1

Description

sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C

Location

Chromosome 1: 36,548,642-36,557,557 reverse strand.

About this transcript

This transcript has 15 exons and is annotated with 22 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000020876 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sema4c-006	OTTMUST00000049354.2	3892	834aa	OTTMUSP00000022847	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48240	Q64151
Sema4c-003	OTTMUST00000049351.2	3779	834aa	OTTMUSP00000022844	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48240	Q64151
Sema4c-001	OTTMUST00000049349.1	3773	834aa	OTTMUSP00000022842	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48240	Q64151
Sema4c-002	OTTMUST00000049350.1	3640	834aa	OTTMUSP00000022843	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48240	Q64151
Sema4c-004	OTTMUST00000049352.15	508	36aa	OTTMUSP00000022845	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sema4c-005	OTTMUST00000049353.2	452	37aa	OTTMUSP00000022846	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sema4c-008	OTTMUST00000049356.1	745	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema4c-007	OTTMUST00000049355.1	618	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 15 Transcript length: 3,640 bps Translation length: 834 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48240

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 17/04/2014 (Created on 02/10/2006)

Alternative symbols

AC084391.1-002

Remarks

alternative 5' UTR

G430091K07Rik

Other assemblies

This transcript maps to 36,548,642-36,557,557 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000195620

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Sema4c-002 OTTMUST00000049350.1

Summary

Transcript-based displays