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Updated annotation

The annotation for this transcript is newer than that present in Ensembl.

Description

protocadherin 15

Location
Gene

This transcript is a product of gene OTTMUSG00000021142

This gene has 41 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
Pcdh15-002OTTMUST0000005005791041677 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56717-
Pcdh15-001OTTMUST0000005006278811943 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35934Q99PJ1
Pcdh15-007OTTMUST0000010419969321938 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56715-
Pcdh15-009OTTMUST0000005006469261936 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56718-
Pcdh15-031OTTMUST0000010420069171933 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48594-
Pcdh15-028OTTMUST0000010418768661916 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56720-
Pcdh15-006OTTMUST0000005006168571913 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56721-
Pcdh15-029OTTMUST0000010419868061896 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS48595-
Pcdh15-036OTTMUST0000012822768021936 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56718-
Pcdh15-016OTTMUST0000010420267191867 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56719-
Pcdh15-030OTTMUST0000005005563221518 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56716-
Pcdh15-004OTTMUST0000005005962871790 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56711-
Pcdh15-010OTTMUST0000010420856961682 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56713-
Pcdh15-019OTTMUST0000010418548781176 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56712-
Pcdh15-027OTTMUST0000010418848631171 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS56714-
Pcdh15-033OTTMUST0000010422059361783 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BLR6
Pcdh15-035OTTMUST0000012822858431675 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-040OTTMUST0000012823453461781 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-021OTTMUST0000005007553361129 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-039OTTMUST0000012823552411714 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-037OTTMUST0000012822950341677 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-034OTTMUST0000012795047151333 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Pcdh15-014OTTMUST000000500563860981 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-017OTTMUST000001041843300650 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-013OTTMUST000000500683074719 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-012OTTMUST000000500672867650 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-011OTTMUST000000500662754334 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-005OTTMUST000000500601891415 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Pcdh15-008OTTMUST000000500635210No protein
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Pcdh15-015OTTMUST000001042036852684 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Pcdh15-032OTTMUST000001042016846684 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Pcdh15-003OTTMUST000000500583315326 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Pcdh15-025OTTMUST000000501613404No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pcdh15-018OTTMUST000000500722841No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pcdh15-041OTTMUST00000128236556No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Pcdh15-038OTTMUST000001282305272No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-023OTTMUST000000501592712No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-022OTTMUST000000501582436No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-024OTTMUST000000501601024No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-020OTTMUST00000050074691No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Pcdh15-026OTTMUST00000050162462No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 35 Transcript length: 7,881 bps Translation length: 1,943 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35934

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 08/05/2014 (Created on 19/10/2006)

Alternative symbols

RP23-139H21.1-001

Remarks

NP_075604.2

Other assemblies

This transcript maps to 73,821,883-74,633,598 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays