Description
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
Location
Chromosome 3: 88,435,962-88,455,697 reverse strand.
About this transcript
This transcript has 13 exons and is annotated with 15 domains and features.
Gene
This transcript is a product of gene OTTMUSG00000021258 Show transcript tableHide transcript table
Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt | Flags |
---|---|---|---|---|---|---|---|---|
Sema4a-001 | OTTMUST00000050356.2 | 3205 | 760aa | OTTMUSP00000023497 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | CCDS17475 | Q62178 | |
Sema4a-002 | OTTMUST00000050357.1 | 2897 | 628aa | OTTMUSP00000023498 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3YWV5 | |
Sema4a-004 | OTTMUST00000050359.2 | 845 | 233aa | OTTMUSP00000023500 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3YZ30 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Sema4a-005 | OTTMUST00000050360.2 | 706 | 203aa | OTTMUSP00000023501 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3YUM4 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Sema4a-003 | OTTMUST00000050358.2 | 630 | 60aa | OTTMUSP00000023499 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3YVM6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Sema4a-011 | OTTMUST00000050366.2 | 506 | 113aa | OTTMUSP00000023503 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3Z336 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Sema4a-010 | OTTMUST00000050365.3 | 385 | 17aa | OTTMUSP00000023502 | <p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding | - | D3YWK5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete |
Sema4a-008 | OTTMUST00000050363.2 | 866 | 170aa | OTTMUSP00000065316 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | V9GXF5 | |
Sema4a-009 | OTTMUST00000050364.2 | 748 | 180aa | OTTMUSP00000065317 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | V9GXH9 | |
Sema4a-007 | OTTMUST00000050362.2 | 699 | 47aa | OTTMUSP00000065315 | Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay | - | V9GWW2 | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete |
Sema4a-012 | OTTMUST00000050367.1 | 371 | No protein | - | <p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript | - | - | |
Sema4a-015 | OTTMUST00000050370.1 | 2487 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Sema4a-014 | OTTMUST00000050369.1 | 2357 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Sema4a-016 | OTTMUST00000050371.1 | 2108 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Sema4a-006 | OTTMUST00000050361.1 | 713 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - | |
Sema4a-013 | OTTMUST00000050368.1 | 465 | No protein | - | <p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron | - | - |