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Updated annotation available

There is updated annotation for this transcript available here.


procollagen type XI alpha 1


This transcript is a product of gene OTTMUSG00000022509

This gene has 4 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Col11a1-001OTTMUST000000538887667OTTMUSP000000256521804Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS17778
Col11a1-004OTTMUST000000538942064OTTMUSP00000025655568Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Col11a1-003OTTMUST000000538932570OTTMUSP00000065374536Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. 5'-
Col11a1-002OTTMUST000000538892112No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--

Exons: 67 Transcript length: 7,667 bps Translation length: 1,804 residues


This transcript is a member of the Mouse CCDS set: CCDS17778


Known protein coding [Definition]


This transcript was annotated by Havana

Version & date

Version 3, last modified on 05/02/2013 (Created on 19/01/2007)

Alternative symbols




Other assemblies

This transcript maps to 114,030,540-114,220,718 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays