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Updated annotation available

There is updated annotation for this transcript available here.

Description

partner and localizer of BRCA2

About this transcript

This transcript has 13 exons and is annotated with 7 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Palb2-001OTTMUST0000005426937501104aaOTTMUSP00000025884
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS40117Q3U0P1
Palb2-002OTTMUST000000542702559741aaOTTMUSP00000025885
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS72035-
Palb2-004OTTMUST0000005427233041030aaOTTMUSP00000025887
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YVU6
Palb2-006OTTMUST000000542743216544aaOTTMUSP00000045934
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Palb2-003OTTMUST000000542711553384aaOTTMUSP00000025886
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Palb2-005OTTMUST00000054273318138aaOTTMUSP00000030962
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6RDD1
Palb2-007OTTMUST00000084850135018aaOTTMUSP00000045776
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6VTV6 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Palb2-008OTTMUST00000084920709No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 13 Transcript length: 3,750 bps Translation length: 1,104 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS40117

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 26/01/2007)

Alternative symbols

AC124379.2-001

Remarks

CCDS40117.1

F830038L21Rik

F830212P13Rik

NP_001074707

Other assemblies

This transcript maps to 122,107,262-122,132,946 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays