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Updated annotation available

There is updated annotation for this transcript available here.

Description

peroxisome proliferative activated receptor, gamma, coactivator 1 alpha

Location
About this transcript

This transcript has 13 exons and is annotated with 12 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Ppargc1a-001OTTMUST000000546356464797aaOTTMUSP00000026095
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS19282O70343
Ppargc1a-004OTTMUST000001352342754696aaOTTMUSP00000071592
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Ppargc1a-003OTTMUST00000054637488142aaOTTMUSP00000026096
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z4V5 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Ppargc1a-006OTTMUST000001352241314No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Ppargc1a-007OTTMUST000001352251252No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Ppargc1a-002OTTMUST000000546363041270aaOTTMUSP00000065370
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-Q3LIG2
Ppargc1a-005OTTMUST000001352262452266aaOTTMUSP00000071590
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Statistics

Exons: 13 Transcript length: 6,464 bps Translation length: 797 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19282

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 30/10/2014 (Created on 30/01/2007)

Alternative symbols

AC116763.1-001

Annotation Attributes

3' standard supported extension [Definitions]

Other assemblies

This transcript maps to 51,454,250-51,553,922 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays