Transcript: Cyp2c40-002 OTTMUST00000088799.1

Description

cytochrome P450, family 2, subfamily c, polypeptide 40

Location

About this transcript

This transcript has 10 exons and is annotated with 11 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Cyp2c40-001	OTTMUST00000070108.3	1803	520aa	OTTMUSP00000035692	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29798	P56657
Cyp2c40-004	OTTMUST00000088801.2	382	120aa	OTTMUSP00000048445	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E0CXY8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Cyp2c40-002	OTTMUST00000088799.1	1638	194aa	OTTMUSP00000048444	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E0CYU2
Cyp2c40-003	OTTMUST00000088800.1	693	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Cyp2c40-005	OTTMUST00000088802.1	347	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 10 Transcript length: 1,638 bps Translation length: 194 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 01/10/2013 (Created on 18/08/2009)

Alternative symbols

AC121935.1-002

Other assemblies

This transcript maps to 39,767,227-39,812,814 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000162630

Curation Method

Manual annotation from Havana