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Description

excision repair cross-complementing rodent repair deficiency, complementation group 1

Location
About this transcript

This transcript has 10 exons and is annotated with 6 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Ercc1-001OTTMUST000000758251375298aaOTTMUSP00000039817
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS20898P07903
Ercc1-002OTTMUST000000758261175245aaOTTMUSP00000041904
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS52057E9PUM0
Ercc1-008OTTMUST00000110175370123aaOTTMUSP00000061415
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-H3BLF5 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Ercc1-003OTTMUST0000007582746786aaOTTMUSP00000061417
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BJK4
Ercc1-009OTTMUST0000011017641337aaOTTMUSP00000061416
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-H3BJX2 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Ercc1-005OTTMUST00000075853584No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Ercc1-007OTTMUST000000787261179No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Ercc1-004OTTMUST00000075852797No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Ercc1-006OTTMUST00000075854712No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Ercc1-010OTTMUST00000110177421No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 10 Transcript length: 1,375 bps Translation length: 298 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS20898

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 02/01/2008)

Alternative symbols

AC148988.3-001

Remarks

9230109N19Rik

CCDS20898.1

E430009H20Rik

NP_031974

Other assemblies

This transcript maps to 19,344,778-19,356,524 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays