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Description

upstream transcription factor 1

About this transcript

This transcript has 10 exons and is annotated with 7 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Usf1-001OTTMUST000000767572167310aaOTTMUSP00000040457
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS15495Q61069
Usf1-002OTTMUST000000767581878296aaOTTMUSP00000040458
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q722
Usf1-004OTTMUST00000076760721148aaOTTMUSP00000043302
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E0CYP7 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Usf1-003OTTMUST00000076759111548aaOTTMUSP00000040459
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WGH6
Usf1-006OTTMUST00000076762305No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Usf1-009OTTMUST00000081357779No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Usf1-007OTTMUST00000076814696No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Usf1-008OTTMUST00000076815492No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Usf1-005OTTMUST00000076761269No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 10 Transcript length: 2,167 bps Translation length: 310 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS15495

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 02/10/2013 (Created on 23/01/2008)

Alternative symbols

AC087229.7-001

Remarks

D530007I20Rik

Other assemblies

This transcript maps to 171,411,313-171,419,142 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays