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Description

sphingosine phosphate lyase 1

Location
Gene

This transcript is a product of gene OTTMUSG00000031946

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
Sgpl1-002OTTMUST000000792544102568 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35914Q8R0X7
Sgpl1-001OTTMUST000000792534070568 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS35914Q8R0X7
Sgpl1-007OTTMUST0000007925978958 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YY13 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sgpl1-003OTTMUST00000079255732199 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3YZT4 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sgpl1-004OTTMUST00000079256421104 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-D3Z1Z3 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sgpl1-006OTTMUST000000792584361487 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-D6REF7
Sgpl1-008OTTMUST00000079260492No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Sgpl1-010OTTMUST00000079262863No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Sgpl1-005OTTMUST00000079257519No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Sgpl1-009OTTMUST00000079261474No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 15 Transcript length: 4,070 bps Translation length: 568 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS35914

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/10/2013 (Created on 17/03/2008)

Alternative symbols

RP23-425D13.1-001

Other assemblies

This transcript maps to 61,098,642-61,147,674 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays