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Description

survival motor neuron 1

Gene

This transcript is a product of gene OTTMUSG00000033496

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Smn1-001OTTMUST000000842391222OTTMUSP00000045374288Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS26725
Smn1-008OTTMUST00000084246485OTTMUSP00000045377162Protein codingGenes and/or transcript that contains an open reading frame (ORF).5' and 3'-
Smn1-003OTTMUST00000084241223OTTMUSP0000004537539Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Smn1-004OTTMUST00000084242378No protein product-ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.--
Smn1-006OTTMUST00000084244421OTTMUSP0000004537646Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Smn1-005OTTMUST00000084243639No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Smn1-007OTTMUST00000084245600No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Smn1-009OTTMUST00000084247547No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Smn1-002OTTMUST00000084240453No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Smn1-010OTTMUST00000084248417No protein product-Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.--
Statistics

Exons: 9 Transcript length: 1,222 bps Translation length: 288 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS26725

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 25/07/2012 (Created on 04/09/2008)

Alternative symbols

RP23-333E24.4-001

Other assemblies

This transcript maps to 100,124,852-100,137,690 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays