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Description

tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase

Location
Gene

This transcript is a product of gene OTTMUSG00000034977

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
Trmu-001OTTMUST000000889431526417 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS27726Q9DAT5
Trmu-006OTTMUST0000008894866558 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F7CNH0 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Trmu-004OTTMUST0000008894646899 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E0CZ49
Trmu-005OTTMUST00000088947314104 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F7CCK8 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Trmu-002OTTMUST00000088944774No protein
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
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Trmu-003OTTMUST000000889452077No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Trmu-008OTTMUST00000088950869No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Trmu-009OTTMUST00000088951814No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Trmu-007OTTMUST00000088949743No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
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Statistics

Exons: 11 Transcript length: 1,526 bps Translation length: 417 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS27726

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 02/10/2013 (Created on 24/08/2009)

Alternative symbols

RP23-151N6.1-001

Other assemblies

This transcript maps to 85,879,320-85,897,392 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays