Transcript: Sema3c-001 OTTMUST00000090077.3

Description

sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3C

Location

About this transcript

This transcript has 18 exons and is annotated with 17 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Sema3c-001	OTTMUST00000090077.3	5491	751aa	OTTMUSP00000049340	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS19099	Q62181
Sema3c-005	OTTMUST00000090155.4	785	226aa	OTTMUSP00000049402	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q0Z0	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Sema3c-003	OTTMUST00000090135.14	1142	42aa	OTTMUSP00000049385	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	E9PXL2
Sema3c-004	OTTMUST00000090136.3	4075	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Sema3c-002	OTTMUST00000090134.1	1549	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 5,491 bps Translation length: 751 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS19099

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 27/08/2014 (Created on 24/12/2009)

Alternative symbols

RP23-20H6.1-001

Remarks

9330166N11Rik

B430214B22Rik

NP_038685

Other assemblies

This transcript maps to 17,574,281-17,730,268 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000030568

Curation Method

Manual annotation from Havana