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Description

adenomatosis polyposis coli

Location
About this transcript

This transcript has 16 exons and is annotated with 62 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Apc-001OTTMUST0000009232988672842aaOTTMUSP00000051004
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29125B2RUG9
Apc-002OTTMUST0000009232835881133aaOTTMUSP00000051003
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q4H1 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Apc-005OTTMUST000000923331185324aaOTTMUSP00000051006
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q8C493
Apc-006OTTMUST00000092334263351aaOTTMUSP00000051007
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6Q4R2 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Apc-008OTTMUST0000009233160821aaOTTMUSP00000051005
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6Z405 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Apc-007OTTMUST00000092335435No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Apc-004OTTMUST000000923322732No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Apc-003OTTMUST000000923301825No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 16 Transcript length: 8,867 bps Translation length: 2,842 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29125

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 13/05/2010)

Alternative symbols

RP23-268M6.1-001

Remarks

A630052K07Rik

B230364G07Rik

B430204A10Rik

NP_031488

Other assemblies

This transcript maps to 34,220,984-34,318,608 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays