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Description

very low density lipoprotein receptor

Location
Gene

This transcript is a product of gene OTTMUSG00000035962

This gene has 9 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Vldlr-001OTTMUST000000922607971 bp873 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS29721P98156
Vldlr-002OTTMUST000000922673855 bp845 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS50411Q91YY0
Vldlr-006OTTMUST000000922753260 bp804 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F8WGI9
Vldlr-009OTTMUST00000092295774 bp258 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6RKS4 CDS 5' and 3' incomplete5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.
Vldlr-007OTTMUST00000092292454 bp89 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-E9Q643 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Vldlr-004OTTMUST000000922722356 bp No protein product
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Vldlr-005OTTMUST000000922743253 bp498 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F8WIN7
Vldlr-008OTTMUST00000092293511 bp No protein product
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Vldlr-003OTTMUST000000922714895 bp No protein product
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 19 Transcript length: 7,971 bps Translation length: 873 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS29721

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 10/03/2012 (Created on 11/05/2010)

Alternative symbols

RP24-498L9.1-001

Remarks

NP_038731.2

Other assemblies

This transcript maps to 27,217,357-27,254,231 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays