Transcript: Alcam-003 OTTMUST00000092839.1

Description

activated leukocyte cell adhesion molecule

Location

About this transcript

This transcript has 11 exons and is annotated with 17 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Alcam-001	OTTMUST00000092838.2	6036	583aa	OTTMUSP00000051383	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS37356	Q61490
Alcam-004	OTTMUST00000092848.1	1917	570aa	OTTMUSP00000051393	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q3Q6
Alcam-005	OTTMUST00000092843.1	1885	555aa	OTTMUSP00000051386	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q4G8
Alcam-003	OTTMUST00000092839.1	1621	345aa	OTTMUSP00000051384	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	F6QH25	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Alcam-002	OTTMUST00000092844.1	878	133aa	OTTMUSP00000051387	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q5MPX5
Alcam-006	OTTMUST00000092842.1	642	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Alcam-007	OTTMUST00000092841.1	439	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 11 Transcript length: 1,621 bps Translation length: 345 residues

Class

Novel protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 04/06/2010)

Alternative symbols

RP24-540H15.1-003

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 52,251,087-52,296,924 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000167115

Curation Method

Manual annotation from Havana