MouseVega Home
Description

chloride channel 1

Location
Gene

This transcript is a product of gene OTTMUSG00000036880

This gene has 10 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDbpProteinBiotypeCCDSUniProtFlags
Clcn1-001OTTMUST000000947383545994 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS39471Q64347
Clcn1-008OTTMUST000000947453504641 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TTA5 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-003OTTMUST000000947412770923 aa
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-F6QI82 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-004OTTMUST000000947433029262 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F7C9S1 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-006OTTMUST000000947422899229 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6QL23 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-007OTTMUST000000947392838258 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-E9Q2N3
Clcn1-002OTTMUST000000947402817289 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6X177 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-005OTTMUST000000947442744257 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F7A9J6 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-009OTTMUST00000094746417104 aa
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-F6VSA8 CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Clcn1-010OTTMUST00000094747774No protein
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 23 Transcript length: 3,545 bps Translation length: 994 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS39471

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 16/09/2010)

Alternative symbols

RP23-329D23.3-001

Remarks

9830168O13Rik

CCDS39471.1

NP_038519

Other assemblies

This transcript maps to 42,286,685-42,314,656 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays