MouseVega Home

Updated annotation available

There is updated annotation for this transcript available here.

Description

gamma-aminobutyric acid (GABA) B receptor, 1

Location
About this transcript

This transcript has 23 exons and is annotated with 52 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Gabbr1-001OTTMUST000000963175248960aaOTTMUSP00000053799
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37616Q9WV18
Gabbr1-002OTTMUST000000963234036844aaOTTMUSP00000053803
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Gabbr1-003OTTMUST000000963191595229aaOTTMUSP00000053801
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TWR2
Gabbr1-004OTTMUST000000963211460229aaOTTMUSP00000053802
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3TWR2
Gabbr1-008OTTMUST00000096324821213aaOTTMUSP00000053804
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-G3UZ52 CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Gabbr1-005OTTMUST000000963184204177aaOTTMUSP00000053800
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-G3UXR6
Gabbr1-007OTTMUST00000096322303No protein-
 
Processed transcriptTranscripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.
--
Gabbr1-011OTTMUST00000096327716No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Gabbr1-010OTTMUST00000096326608No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Gabbr1-009OTTMUST00000096325378No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Gabbr1-006OTTMUST00000096320237No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
--
Statistics

Exons: 23 Transcript length: 5,248 bps Translation length: 960 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS37616

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 17/07/2013 (Created on 10/02/2011)

Alternative symbols

RP23-98F21.5-001

Other assemblies

This transcript maps to 37,045,966-37,075,067 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays