Transcript: Msh2-005 OTTMUST00000098219.2

Description

mutS homolog 2 (E. coli)

Location

About this transcript

This transcript has 4 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Msh2-001	OTTMUST00000098216.1	3283	935aa	OTTMUSP00000055147	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS29019	P43247
Msh2-005	OTTMUST00000098219.2	630	210aa	OTTMUSP00000055148	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UXD8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete
Msh2-006	OTTMUST00000098221.1	510	68aa	OTTMUSP00000055149	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	G3UWZ8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Msh2-002	OTTMUST00000098218.1	2502	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Msh2-003	OTTMUST00000098217.1	1752	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Msh2-004	OTTMUST00000098220.1	409	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 4 Transcript length: 630 bps Translation length: 210 residues

Class

Putative protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/07/2015 (Created on 04/05/2011)

Alternative symbols

RP24-315D17.1-005

Annotation Attributes

not organism-supported [Definitions]

Remarks

CDS start not found

CDS end not found

mRNA start not found

mRNA end not found

Other assemblies

This transcript maps to 87,672,609-87,685,566 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000172855

Curation Method

Manual annotation from Havana