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Description

synuclein, alpha interacting protein (synphilin)

Location
About this transcript

This transcript has 12 exons and is annotated with 17 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSUniProtFlags
Sncaip-001OTTMUST000001115593724965aaOTTMUSP00000062485
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57124G5E848
Sncaip-003OTTMUST000001115603632965aaOTTMUSP00000062486
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57124G5E848
Sncaip-005OTTMUST000001115623433915aaOTTMUSP00000062488
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37820E9Q4E2
Sncaip-004OTTMUST000001115613272915aaOTTMUSP00000062487
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37820E9Q4E2
Sncaip-002OTTMUST000001115583585914aaOTTMUSP00000062484
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3V1N2
Sncaip-011OTTMUST000001115682568855aaOTTMUSP00000062493
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QNK1
Sncaip-010OTTMUST000001115691512503aaOTTMUSP00000062494
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-J3QP58
Sncaip-012OTTMUST0000011156440410aaOTTMUSP00000062489
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sncaip-006OTTMUST000001115633256No protein-
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Sncaip-007OTTMUST00000111566238355aaOTTMUSP00000062491
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3QPG2
Sncaip-009OTTMUST00000111567231255aaOTTMUSP00000062492
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3QPG2
Sncaip-008OTTMUST00000111565190562aaOTTMUSP00000062490
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-J3KMU0
Statistics

Exons: 12 Transcript length: 3,724 bps Translation length: 965 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57124

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 10/01/2012)

Alternative symbols

RP23-193J15.1-001

Remarks

NP_001186082.1

Other assemblies

This transcript maps to 52,767,710-52,915,930 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays