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Description

synuclein, alpha interacting protein (synphilin)

Location
Gene

This transcript is a product of gene OTTMUSG00000042341

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLengthProteinBiotypeCCDSUniProtFlags
Sncaip-001OTTMUST000001115593724 bp965 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57124G5E848
Sncaip-003OTTMUST000001115603632 bp965 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS57124G5E848
Sncaip-005OTTMUST000001115623433 bp915 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37820E9Q4E2
Sncaip-004OTTMUST000001115613272 bp915 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS37820E9Q4E2
Sncaip-002OTTMUST000001115583585 bp914 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-Q3V1N2
Sncaip-011OTTMUST000001115682568 bp855 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Sncaip-010OTTMUST000001115691512 bp503 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--
Sncaip-012OTTMUST00000111564404 bp10 aa (view)
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
--CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Sncaip-006OTTMUST000001115633256 bp No protein product
 
ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.
--
Sncaip-007OTTMUST000001115662383 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Sncaip-009OTTMUST000001115672312 bp55 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Sncaip-008OTTMUST000001115651905 bp62 aa (view)
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
--
Statistics

Exons: 12 Transcript length: 3,724 bps Translation length: 965 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57124

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 10/01/2012)

Alternative symbols

RP23-193J15.1-001

Remarks

NP_001186082.1

Other assemblies

This transcript maps to 52,767,710-52,915,930 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays