MouseVega Home
Description

synuclein, alpha interacting protein (synphilin)

Location
Gene

This transcript is a product of gene OTTMUSG00000042341

This gene has 12 transcripts (splice variants) Show transcript tableHide transcript table

NameTranscript IDLength (bp)Protein IDLength (aa)BiotypeCDS incompleteCCDS
Sncaip-001OTTMUST000001115593724OTTMUSP00000062485965Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS57124
Sncaip-003OTTMUST000001115603632OTTMUSP00000062486965Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS57124
Sncaip-005OTTMUST000001115623433OTTMUSP00000062488915Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS37820
Sncaip-004OTTMUST000001115613272OTTMUSP00000062487915Protein codingGenes and/or transcript that contains an open reading frame (ORF).-CCDS37820
Sncaip-002OTTMUST000001115583585OTTMUSP00000062484914Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Sncaip-011OTTMUST000001115682568OTTMUSP00000062493855Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Sncaip-010OTTMUST000001115691512OTTMUSP00000062494503Protein codingGenes and/or transcript that contains an open reading frame (ORF).--
Sncaip-012OTTMUST00000111564404OTTMUSP0000006248910Protein codingGenes and/or transcript that contains an open reading frame (ORF).3'-
Sncaip-006OTTMUST000001115633256No protein product-ArtifactError in the sequence in a public database (for example UniProtKB, NCBI RefSeq). Annotation is by the VEGA/Havana project.--
Sncaip-007OTTMUST000001115662383OTTMUSP0000006249155Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Sncaip-009OTTMUST000001115672312OTTMUSP0000006249255Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Sncaip-008OTTMUST000001115651905OTTMUSP0000006249062Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. --
Statistics

Exons: 12 Transcript length: 3,724 bps Translation length: 965 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS57124

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 1, last modified on 10/03/2012 (Created on 10/01/2012)

Alternative symbols

RP23-193J15.1-001

Remarks

NP_001186082.1

Other assemblies

This transcript maps to 52,767,710-52,915,930 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Transcript-based displays