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Updated annotation

The annotation for this transcript is newer than that present in Ensembl.

Description

myocyte enhancer factor 2C

Location
About this transcript

This transcript has 11 exons and is annotated with 10 domains and features.

NameTranscript IDbpProteinTranslation IDBiotypeCCDSFlags
Mef2c-003OTTMUST000001369872862466aaOTTMUSP00000072205
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS49320
Mef2c-002OTTMUST000001369862589432aaOTTMUSP00000072204
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
CCDS26664
Mef2c-014OTTMUST000001370826277484aaOTTMUSP00000072248
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-013OTTMUST000001370816217464aaOTTMUSP00000072247
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-001OTTMUST000001171066088442aaOTTMUSP00000065499
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-005OTTMUST000001370734441474aaOTTMUSP00000072243
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-006OTTMUST000001370744361474aaOTTMUSP00000072244
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-012OTTMUST000001370863556472aaOTTMUSP00000072250
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-009OTTMUST000001370833517400aaOTTMUSP00000072249
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-007OTTMUST000001370763498434aaOTTMUSP00000072245
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-008OTTMUST000001370772753442aaOTTMUSP00000072246
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-015OTTMUST000001370871257418aaOTTMUSP00000072251
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-016OTTMUST000001370881185394aaOTTMUSP00000072252
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-
Mef2c-023OTTMUST000001370961060242aaOTTMUSP00000072259
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-030OTTMUST000001371531011249aaOTTMUSP00000072284
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mef2c-026OTTMUST00000137151976170aaOTTMUSP00000072283
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-020OTTMUST00000137092913205aaOTTMUSP00000072256
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-024OTTMUST00000137097873194aaOTTMUSP00000072260
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-025OTTMUST00000137150854227aaOTTMUSP00000072282
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-031OTTMUST00000137155724152aaOTTMUSP00000072286
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mef2c-019OTTMUST00000137091702161aaOTTMUSP00000072255
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-022OTTMUST00000137095689108aaOTTMUSP00000072258
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-021OTTMUST00000137093623120aaOTTMUSP00000072257
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-027OTTMUST00000137148609129aaOTTMUSP00000072280
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-028OTTMUST00000137149556126aaOTTMUSP00000072281
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-018OTTMUST0000013708936329aaOTTMUSP00000072253
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-017OTTMUST0000013709033223aaOTTMUSP00000072254
 
Protein codingGenes and/or transcript that contains an open reading frame (ORF).
-CDS 3' incomplete3' truncation in transcript evidence prevents annotation of the end of the CDS.
Mef2c-029OTTMUST0000013715454680aaOTTMUSP00000072285
 
Nonsense mediated decayTranscript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins.
-CDS 5' incomplete5' truncation in transcript evidence prevents annotation of the start of the CDS.
Mef2c-004OTTMUST000001370754553No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-
Mef2c-011OTTMUST000001370853032No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-
Mef2c-010OTTMUST000001370841391No protein-
 
Retained intronAlternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.
-
Statistics

Exons: 11 Transcript length: 6,088 bps Translation length: 442 residues

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 08/12/2014 (Created on 27/02/2013)

Alternative symbols

RP24-294A11.1-001

Remarks

A930025C09Rik, 5430401D19Rik

Other assemblies

This transcript maps to 83,573,607-83,667,080 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts
Ensembl transcript having exact match with Havana:
Curation Method

Manual annotation from Havana

Transcript-based displays