Transcript: Crlf3-001 OTTMUST00000000558.2

Description

cytokine receptor-like factor 3

Location

Chromosome 11: 80,046,493-80,080,991 reverse strand.

About this transcript

This transcript has 8 exons and is annotated with 7 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000000187 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Crlf3-001	OTTMUST00000000558.2	2396	442aa	OTTMUSP00000000242	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS25126	Q9Z2L7
Crlf3-002	OTTMUST00000000559.1	2230	344aa	OTTMUSP00000000243	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS70260	-
Crlf3-006	OTTMUST00000111212.1	1151	168aa	OTTMUSP00000062189	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Crlf3-007	OTTMUST00000111213.1	1138	79aa	OTTMUSP00000062190	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Crlf3-008	OTTMUST00000111215.1	436	25aa	OTTMUSP00000062191	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Crlf3-003	OTTMUST00000000560.2	1186	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Crlf3-005	OTTMUST00000111214.1	1871	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Crlf3-004	OTTMUST00000000561.1	476	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 8 Transcript length: 2,396 bps Translation length: 442 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS25126

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 10/03/2012 (Created on 19/03/2004)

Alternative symbols

RP23-253E9.5-001

Remarks

9830131H13Rik

A130058O20Rik

CCDS25126.1

I920057I05Rik

NP_061246

Other assemblies

This transcript maps to 80,046,493-80,080,991 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000061283

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Crlf3-001 OTTMUST00000000558.2

Summary

Transcript-based displays