Transcript: Smarcd2-001 OTTMUST00000007203.4

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

Location

Chromosome 11: 106,263,179-106,272,972 reverse strand.

About this transcript

This transcript has 13 exons and is annotated with 11 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000003421 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Smarcd2-001	OTTMUST00000007203.4	2747	531aa	OTTMUSP00000003464	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48958	Q99JR8
Smarcd2-002	OTTMUST00000007204.2	2548	484aa	OTTMUSP00000003465	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS48957	-
Smarcd2-009	OTTMUST00000098172.1	884	247aa	OTTMUSP00000055123	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	G3UXC0	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Smarcd2-007	OTTMUST00000098173.1	608	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smarcd2-003	OTTMUST00000007205.1	405	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Smarcd2-005	OTTMUST00000007207.4	1250	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smarcd2-006	OTTMUST00000007208.2	886	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smarcd2-004	OTTMUST00000007206.3	621	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-
Smarcd2-008	OTTMUST00000098174.1	485	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 13 Transcript length: 2,747 bps Translation length: 531 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS48958

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 10/03/2012 (Created on 28/07/2004)

Alternative symbols

RP23-418O11.4-001

Remarks

CCDS48958.1

NP_001123659

Other assemblies

This transcript maps to 106,263,179-106,272,972 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000021052

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Smarcd2-001 OTTMUST00000007203.4

Summary

Transcript-based displays