Transcript: Gabra1-002 OTTMUST00000012130.4

Description

gamma-aminobutyric acid (GABA) A receptor, subunit alpha 1

Location

Chromosome 11: 42,130,939-42,182,163 reverse strand.

About this transcript

This transcript has 10 exons and is annotated with 37 domains and features.

Gene

This transcript is a product of gene OTTMUSG00000005445 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Gabra1-001	OTTMUST00000012129.1	4688	455aa	OTTMUSP00000005606	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24553	Q544F7
Gabra1-002	OTTMUST00000012130.4	4045	455aa	OTTMUSP00000049803	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS24553	Q544F7
Gabra1-007	OTTMUST00000143804.1	1116	302aa	OTTMUSP00000074954	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RPE4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gabra1-008	OTTMUST00000146053.1	570	167aa	OTTMUSP00000076107	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A140LJE7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gabra1-006	OTTMUST00000143805.1	486	91aa	OTTMUSP00000074955	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9Q2L8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gabra1-005	OTTMUST00000143806.1	423	114aa	OTTMUSP00000074956	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	A0A0U1RQ83	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gabra1-003	OTTMUST00000012131.3	398	132aa	OTTMUSP00000049804	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	E9PXL4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete
Gabra1-004	OTTMUST00000090717.2	2503	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-

Summary

Statistics

Exons: 10 Transcript length: 4,045 bps Translation length: 455 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS24553

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 4, last modified on 13/07/2015 (Created on 26/01/2004)

Alternative symbols

RP23-244K22.1-002

Annotation Attributes

not organism-supported [Definitions]

Remarks

alternative 5' UTR

Other assemblies

This transcript maps to 42,130,939-42,182,163 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000205546

Curation Method

Manual annotation from Havana

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Recent locations

Transcript: Gabra1-002 OTTMUST00000012130.4

Summary

Transcript-based displays