Transcript: Ndc1-001 OTTMUST00000020102.3

Description

NDC1 transmembrane nucleoporin

Location

About this transcript

This transcript has 18 exons and is annotated with 14 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt
Ndc1-001	OTTMUST00000020102.3	4584	673aa	OTTMUSP00000009215	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS18438	Q8VCB1
Ndc1-002	OTTMUST00000020157.3	4320	541aa	OTTMUSP00000062776	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QPB5
Ndc1-003	OTTMUST00000020158.3	2354	42aa	OTTMUSP00000062775	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QMD9
Ndc1-006	OTTMUST00000020161.3	598	42aa	OTTMUSP00000062777	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	J3QMD9
Ndc1-004	OTTMUST00000020159.2	422	No protein	-	<p>Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.</p>Processed transcript	-	-
Ndc1-005	OTTMUST00000020160.2	804	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 18 Transcript length: 4,584 bps Translation length: 673 residues

CCDS

This transcript is a member of the Mouse CCDS set: CCDS18438

Class

Known protein coding [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 3, last modified on 10/03/2012 (Created on 28/02/2005)

Alternative symbols

RP23-392J14.4-001

Other assemblies

This transcript maps to 107,367,784-107,416,346 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000139560

Curation Method

Manual annotation from Havana