Transcript: Swi5-005 OTTMUST00000031180.2

Description

SWI5 recombination repair homolog (yeast)

Location

About this transcript

This transcript has 6 exons and is annotated with 4 domains and features.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt	Flags
Swi5-006	OTTMUST00000031181.1	712	89aa	OTTMUSP00000013950	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS50566	Q8K3D3
Swi5-004	OTTMUST00000031179.2	522	121aa	OTTMUSP00000013949	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	CCDS71026	-
Swi5-001	OTTMUST00000031176.3	775	131aa	OTTMUSP00000013947	<p>Genes and/or transcript that contains an open reading frame (ORF).</p>Protein coding	-	Q8K3D3
Swi5-005	OTTMUST00000031180.2	919	140aa	OTTMUSP00000065811	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete
Swi5-003	OTTMUST00000031178.2	580	42aa	OTTMUSP00000013948	Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay	-	-
Swi5-002	OTTMUST00000031177.2	4511	No protein	-	<p>Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.</p>Retained intron	-	-

Summary

Statistics

Exons: 6 Transcript length: 919 bps Translation length: 140 residues

Class

nonsense mediated decay [Definition]

Author

This transcript was annotated by Havana

Version & date

Version 2, last modified on 17/06/2013 (Created on 01/07/2005)

Alternative symbols

RP23-161B9.6-005

Remarks

CDS start not found

mRNA start not found

Other assemblies

This transcript maps to 32,278,816-32,287,935 in GRCm38 (Ensembl) coordinates.

Jump to this stable ID in Ensembl

Alternative transcripts

Ensembl transcript having exact match with Havana:	ENSMUST00000140406

Curation Method

Manual annotation from Havana